Actually my theory is it was the Leviathan solo.
Here is a list of the spawner objects:
CD85 Null
D185 Zombies slow
2386 Zombies Ground
5988 Medusa Head Solo
C889 Winged Demon
0C8E Skull Knight
0C8E Cyclops
0C8E Grant Danesti
C190 Lightning
BD90 Sypha-statue Bolt
2F91 Thunder clouds
128B Fleaman
4A89 Flying Bat
2D8C Sleeping Bat
F18B Bone Pillar 3shot 1
DD8A Axe Knight
748B Crow Low
C78A Sword Skeleton 1
A686 Jumping Fishmen
268B Blood Whip Skeleton
748B Floating Eye
268B Slime
268B Bone Skeleton
268B Whip Skeleton
638A Ghost no flicker
268B Blood Skeleton
158A Mummy 1
0C8E Giant Bat
5C90 Alucard
148F Bone Dragon King
EF8F Medusa
B28F Water Dragons
0C8E Akmodan+Cyclops
0C8E The Creature
0C8E **REMOVED**
0C8E Death
0C8E Doppelganger
0C8E Demon Triad
0C8E Dracula
748B Crow High
268B Dhuron
8A8B Spider
178C Bone Pillar 2shot
CD85 Flying Bats 3
CD85 Fuzz Buster 2
2289 Floating Spore
E08B Spore Bud
CD85
CD85
CD85
268B Normal Skeleton
CD85
CD85
CD85
0A8D 3-Tile Current 1
CD85
CD85
0A8D 2-Tile Current 1
4C86 Zombies fast 1
9D87 Mudman
4A87 Frog
A086 Swimming Fishman
A086 Swimming Fishman Jumping
268B Fireman
128B Knight
F18B Bone Pillar 3shot 2
3C8D Auto-Walk to Forest Door
4E8C Bone Dragon
898A Owl
A08A Fuzz Buster
AA88 Harpy
4A89 Flying Bats 2
0B88 Medusa Head Duo 1
FE8A Sword Skeleton 2
F087 Medusa Head duo 2
5B8A Ghost flicker
3C8D Auto-Walk to Cave Door
0A8D 3-Tile Current 2
0A8D 2-Tile Current 2
7686 Zombies fast 2
158A Mummy 2
FA86 Flood
Grant and the Cyclops are much higher up in the data since they were added for special situations. The numbers on the left are the spawner codes.
I said all bosses have the same code, but I forgot about the others. Water Dragons have a different code because there are two of them. Alucard has his multiple bats, hence he has a special code. Medusa has her many snakes, hence she has a special code. The Bone Dragon King has all his many ribs, hence the special code. Akmodan+Cyclops and Demon Triad use the singular boss code because the boss is actually the wisp. As you can see though, the removed enemy has a singular boss code, so it was intended to be a single enemy. Akmodan was comprised of two, so he would have had a special code if he was the deleted boss. Hence, I think it was Leviathan.
You'll also notice the awkwardly located empty codes. CD85 is a null code that forces the spawner to skip its phases, meaning anything that has CD85 as the spawner code won't spawn at all. The ones between the water currents I think were supposed to be the gears in the Clocktower but the programmers decided to rework the code for them.