NO NO NO you don't get it!
He's not there sited by 2000 years, he's just "resurrected" as usual because that's the "usual" 1999 resurrection! Death wasn't there yet, light will be shed soon I think... Zobek has been there all the time but he didn't interfere, he didn't mind about Drac until Satan would be resurrected (or brought back to the living world). The DEMON castle Wars are about the whole world fighting SATAN, Dracula dies at the end? Sure, but that's because ZOBEK promised him that, we just sought that!... my God this game is awesome, noe THE TIMLINE ACTUALLY HAS SENSE!

Premature resurrections?. Explained.
"Death" working for a man?. Explained.
Why does Dracula dies at the end of 1999 and wahy that battle was different to all the others?. Explained.
Why Dracula calls himself Dracula?. Explained.